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Research & Applications

Real-world case studies and research workflows

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Estimated Time
3-4 hours

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1
Drug Discovery with AlphaFold2: A Complete Workflow
Featured
case-study35 min read

Drug Discovery with AlphaFold2: A Complete Workflow

From target identification to lead optimization: learn how predicted structures accelerate drug discovery timelines and reduce costs in real-world case studies.

alphafolddrug-discoverycase-study
P

Protogen Team

Computational Drug Discovery

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2
Antibody-Antigen Structure Prediction for Therapeutic Development
Featured
case-study28 min read

Antibody-Antigen Structure Prediction for Therapeutic Development

Complete workflow for predicting antibody-antigen complexes: from CDR annotation to epitope mapping and affinity maturation guidance.

drug-discoverydrug-discoveryalphafold
P

Protogen Team

Therapeutic Development

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3
Membrane Protein Structure Prediction: GPCRs, Ion Channels, and Transporters
case-study18 min read

Membrane Protein Structure Prediction: GPCRs, Ion Channels, and Transporters

Master the challenges of predicting transmembrane proteins: topology validation, lipid bilayer context, and conformational states.

researchresearchdrug-discovery
P

Protogen Team

Membrane Protein Specialists

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4
Protein-Ligand Docking with AlphaFold2 Structures
case-study20 min read

Protein-Ligand Docking with AlphaFold2 Structures

Integrate structure prediction with virtual screening: prepare structures, define binding sites, and discover hit compounds.

drug-discoverydrug-discoverydrug-discovery
P

Protogen Team

Drug Discovery

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5
Academic Research Workflow: From Hypothesis to Publication
case-study22 min read

Academic Research Workflow: From Hypothesis to Publication

Complete guide for academic researchers: experimental design, structural analysis, figure preparation, and manuscript writing.

researchresearchresearch
P

Protogen Team

Research Support

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6
High-Throughput Structure Prediction Pipelines
case-study24 min read

High-Throughput Structure Prediction Pipelines

Scale AlphaFold2 for proteome-wide analysis: batch processing, quality control, and resource optimization for thousands of proteins.

researchresearchresearch
P

Protogen Team

Infrastructure

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